Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DS966_11310 | Not Available | Positive | 2276997 - 2278361 | 49198.8 |
| tryptophanase leader peptide | DS966_11315 | Not Available | Positive | 2278603 - 2278677 | 2894.56 |
| tryptophanase | DS966_11320 | Not Available | Positive | 2278898 - 2280313 | 52776.4 |
| low affinity tryptophan permease tnab | DS966_11325 | Not Available | Positive | 2280405 - 2281652 | 45273.3 |
| multidrug resistance protein mdtl | DS966_11330 | Not Available | Positive | 2281784 - 2282959 | 41462.1 |
| transcriptional regulator | DS966_11335 | Not Available | Positive | 2282934 - 2283893 | 36919.9 |
| hypothetical protein | DS966_11340 | Not Available | Positive | 2284050 - 2284799 | 27633.3 |
| chromate reductase | DS966_11345 | Not Available | Positive | 2284821 - 2285387 | 20406.8 |
| ncs2 family permease | DS966_11350 | Not Available | Negative | 2285440 - 2286777 | 46829.7 |
| 6-phosphogluconate phosphatase | DS966_11355 | Not Available | Positive | 2286944 - 2287609 | 24810.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





