Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycek/yidq family lipoprotein | DS966_11210 | Not Available | Positive | 2257898 - 2258230 | 11808.3 |
| duf3748 domain-containing protein | DS966_11215 | Not Available | Negative | 2258232 - 2259479 | 46289.2 |
| fad-binding protein | DS966_11220 | Not Available | Positive | 2259547 - 2260647 | 41539.2 |
| mfs transporter | DS966_11225 | Not Available | Negative | 2260608 - 2261900 | 47092.5 |
| d-galactonate dehydratase | DS966_11230 | Not Available | Negative | 2262020 - 2263168 | 42555.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | DS966_11235 | Not Available | Negative | 2263165 - 2263782 | 21417.9 |
| 2-oxo-3-deoxygalactonate kinase | DS966_11240 | Not Available | Negative | 2263766 - 2264644 | 31375.3 |
| transcriptional regulator | DS966_11245 | Not Available | Negative | 2264641 - 2265330 | 26081.1 |
| hypothetical protein | DS966_11250 | Not Available | Positive | 2265609 - 2266265 | 24093.7 |
| sugar phosphatase yida | DS966_11255 | Not Available | Negative | 2266309 - 2267121 | 29722.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





