Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | DS966_10960 | Not Available | Positive | 2207170 - 2207793 | 23594.1 |
| dna-directed rna polymerase subunit omega | DS966_10965 | Not Available | Positive | 2207848 - 2208123 | 10237.2 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | DS966_10970 | Not Available | Positive | 2208142 - 2210250 | 79360.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | DS966_10975 | Not Available | Positive | 2210257 - 2210946 | 25360.6 |
| atp-dependent dna helicase recg | DS966_10980 | Not Available | Positive | 2210952 - 2213033 | 76527.2 |
| sodium/glutamate symport carrier protein | DS966_10985 | Not Available | Negative | 2213067 - 2214272 | 42445.9 |
| xanthine permease xanp | DS966_10990 | Not Available | Positive | 2214552 - 2215943 | 48871.2 |
| asma family protein | DS966_10995 | Not Available | Positive | 2216064 - 2217773 | 62286.8 |
| d-lyxose/d-mannose family sugar isomerase | DS966_11000 | Not Available | Negative | 2217817 - 2218497 | 26181.1 |
| rok family protein | DS966_11005 | Not Available | Negative | 2218478 - 2219410 | 32958.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





