Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide 3-alpha-galactosyltransferase | DS966_10860 | Not Available | Negative | 2189864 - 2190880 | 38903.0 |
| lipopolysaccharide core heptose(i) kinase rfap | DS966_10865 | Not Available | Negative | 2190896 - 2191693 | 30979.0 |
| glycosyltransferase family 1 protein | DS966_10870 | Not Available | Negative | 2191686 - 2192810 | 42558.7 |
| lipopolysaccharide core heptosyltransferase rfaq | DS966_10875 | Not Available | Negative | 2192807 - 2193865 | 39462.9 |
| 3-deoxy-d-manno-octulosonic acid transferase | DS966_10880 | Not Available | Positive | 2194278 - 2195555 | 47309.9 |
| phosphopantetheine adenylyltransferase | DS966_10885 | Not Available | Positive | 2195563 - 2196042 | 17895.7 |
| formamidopyrimidine-dna glycosylase | DS966_10890 | Not Available | Negative | 2196081 - 2196890 | 30261.8 |
| 50s ribosomal protein l33 | DS966_10895 | Not Available | Negative | 2196988 - 2197155 | 6371.94 |
| 50s ribosomal protein l28 | DS966_10900 | Not Available | Negative | 2197176 - 2197412 | 9007.02 |
| jab domain-containing protein | DS966_10905 | Not Available | Negative | 2197629 - 2198297 | 25259.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





