Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 3-epimerase | DS966_10650 | Not Available | Positive | 2143147 - 2144007 | 32494.9 |
| l-ribulose-5-phosphate 4-epimerase | DS966_10655 | Not Available | Positive | 2144001 - 2144696 | 25570.5 |
| aldehyde dehydrogenase | DS966_10660 | Not Available | Negative | 2144743 - 2146281 | 56353.6 |
| fic family protein | DS966_10665 | Not Available | Negative | 2146389 - 2147684 | 48485.2 |
| l-threonine dehydrogenase | DS966_10670 | Not Available | Negative | 2147814 - 2148965 | 40366.7 |
| selenocysteinyl-trna-specific translation elongation factor selb | DS966_10675 | Not Available | Negative | 2149156 - 2151000 | 68856.5 |
| l-selenocysteinyl-trna(sec) synthase | DS966_10680 | Not Available | Negative | 2150997 - 2152388 | 50698.3 |
| glutathione s-transferase | DS966_10685 | Not Available | Negative | 2152486 - 2153094 | 22546.3 |
| hlyd family secretion protein | DS966_10690 | Not Available | Negative | 2153165 - 2154301 | 41946.8 |
| duf3302 domain-containing protein | DS966_10695 | Not Available | Negative | 2154304 - 2154666 | 13910.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





