Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c peroxidase | DS966_10290 | Not Available | Negative | 2062635 - 2064032 | 51542.3 |
| trehalase | DS966_10295 | Not Available | Positive | 2064437 - 2066086 | 63727.1 |
| dna-binding response regulator | DS966_10300 | Not Available | Negative | 2066137 - 2066739 | 22586.5 |
| lysr family transcriptional regulator | DS966_10305 | Not Available | Positive | 2067259 - 2068158 | 33237.4 |
| inner membrane protein yhjd | DS966_10310 | Not Available | Positive | 2068207 - 2069220 | 37902.6 |
| mfs transporter | DS966_10315 | Not Available | Positive | 2069613 - 2070935 | 47226.9 |
| asma family protein | DS966_10320 | Not Available | Negative | 2070976 - 2073036 | 74416.7 |
| cyclic di-gmp phosphodiesterase yhjh | DS966_10325 | Not Available | Negative | 2073106 - 2073873 | 29588.9 |
| hypothetical protein | DS966_10330 | Not Available | Positive | 2073842 - 2074021 | 6791.6 |
| sugar kinase | DS966_10335 | Not Available | Positive | 2074105 - 2075034 | 34009.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





