Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate-semialdehyde dehydrogenase | DS966_10115 | Not Available | Positive | 2027651 - 2029039 | 49685.7 |
| glutaminase | DS966_10120 | Not Available | Positive | 2029103 - 2030029 | 33499.6 |
| duf4186 domain-containing protein | DS966_10125 | Not Available | Positive | 2030029 - 2030388 | 13570.5 |
| ggdef domain-containing protein | DS966_10135 | Not Available | Positive | 2030998 - 2031945 | 34272.2 |
| diguanylate cyclase | DS966_10140 | Not Available | Positive | 2031896 - 2032027 | 5002.24 |
| tagaturonate reductase | DS966_10145 | Not Available | Positive | 2032172 - 2033623 | 54893.4 |
| hypothetical protein | DS966_10150 | Not Available | Negative | 2033670 - 2033870 | 7996.91 |
| bestrophin family inner membrane protein | DS966_10155 | Not Available | Positive | 2033820 - 2034734 | 34811.0 |
| trans-aconitate 2-methyltransferase | DS966_10160 | Not Available | Negative | 2034738 - 2035496 | 29010.4 |
| transcriptional regulator | DS966_10165 | Not Available | Positive | 2035804 - 2036070 | 9957.84 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





