Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynfc family lipoprotein | DS966_09950 | Not Available | Positive | 2001100 - 2001810 | 26501.3 |
| spermidine n1-acetyltransferase | DS966_09955 | Not Available | Negative | 2001813 - 2002373 | 21902.3 |
| duf1283 family protein | DS966_09960 | Not Available | Negative | 2002408 - 2002749 | 12974.5 |
| ynfa family protein | DS966_09965 | Not Available | Positive | 2002884 - 2003210 | 11902.1 |
| hypothetical protein | DS966_09970 | Not Available | Positive | 2003247 - 2003435 | 7290.75 |
| starvation-sensing protein rspa | DS966_09975 | Not Available | Positive | 2003416 - 2004630 | 45986.0 |
| zn-dependent oxidoreductase | DS966_09980 | Not Available | Positive | 2004642 - 2005661 | 36511.1 |
| mfs transporter | DS966_09985 | Not Available | Positive | 2005719 - 2007086 | 49301.6 |
| protein ydfz | DS966_09995 | Not Available | Negative | 2008671 - 2008874 | 7276.83 |
| transcriptional regulator | DS966_10000 | Not Available | Negative | 2009051 - 2009737 | 26566.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





