Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DS966_09900 | Not Available | Positive | 1988964 - 1989857 | 33333.4 |
| rok family transcriptional regulator | DS966_09905 | Not Available | Positive | 1989992 - 1991212 | 44292.7 |
| dethiobiotin synthase | DS966_09910 | Not Available | Positive | 1991337 - 1992032 | 24968.4 |
| voltage-gated clc-type chloride channel clcb | DS966_09915 | Not Available | Negative | 1991985 - 1993277 | 45609.0 |
| tat proofreading chaperone dmsd | DS966_09920 | Not Available | Negative | 1993437 - 1994051 | 23386.8 |
| dimethyl sulfoxide reductase anchor subunit | DS966_09925 | Not Available | Negative | 1994094 - 1994948 | 30543.7 |
| dimethylsulfoxide reductase | DS966_09930 | Not Available | Negative | 1994950 - 1995567 | 22752.9 |
| dimethyl sulfoxide reductase subunit a | DS966_09935 | Not Available | Negative | 1995578 - 1998001 | 89939.0 |
| dimethyl sulfoxide reductase subunit a | DS966_09940 | Not Available | Negative | 1998062 - 2000488 | 89690.8 |
| duf1161 domain-containing protein | DS966_09945 | Not Available | Negative | 2000687 - 2000992 | 10548.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





