Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkene reductase | DS966_09590 | Not Available | Negative | 1931006 - 1932103 | 39518.7 |
| transcriptional regulator | DS966_09595 | Not Available | Negative | 1932140 - 1932739 | 22276.7 |
| duf1289 domain-containing protein | DS966_09600 | Not Available | Positive | 1932842 - 1933081 | 9427.28 |
| aldo/keto reductase family oxidoreductase | DS966_09605 | Not Available | Positive | 1933130 - 1934026 | 33666.6 |
| superoxide dismutase | DS966_09610 | Not Available | Positive | 1934107 - 1934628 | 17668.0 |
| fusc family protein | DS966_09615 | Not Available | Negative | 1934629 - 1936641 | 75253.9 |
| hlyd family secretion protein | DS966_09620 | Not Available | Negative | 1936641 - 1937498 | 31541.6 |
| duf1656 domain-containing protein | DS966_09625 | Not Available | Negative | 1937501 - 1937737 | 8886.31 |
| slya family transcriptional regulator | DS966_09630 | Not Available | Positive | 1937938 - 1938372 | 16381.1 |
| outer membrane lipoprotein slyb | DS966_09635 | Not Available | Negative | 1938419 - 1938886 | 15628.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





