Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | DS966_09435 | Not Available | Positive | 1904428 - 1905432 | 35991.4 |
| murein lipoprotein | DS966_09440 | Not Available | Negative | 1905495 - 1905731 | 8323.95 |
| pyruvate kinase | DS966_09445 | Not Available | Negative | 1906042 - 1907454 | 50732.5 |
| fumarate hydratase fumd | DS966_09450 | Not Available | Positive | 1908011 - 1908220 | 7907.85 |
| hypothetical protein | DS966_09455 | Not Available | Positive | 1908676 - 1909302 | 22367.2 |
| aldehyde ferredoxin oxidoreductase | DS966_09460 | Not Available | Positive | 1909323 - 1911425 | 77909.9 |
| ydhw family putative oxidoreductase system protein | DS966_09465 | Not Available | Positive | 1911429 - 1912076 | 24486.8 |
| 4fe-4s dicluster domain-containing protein | DS966_09470 | Not Available | Positive | 1912140 - 1912808 | 25058.0 |
| thiosulfate reductase cytochrome b subunit | DS966_09475 | Not Available | Positive | 1912805 - 1913590 | 29537.5 |
| hypothetical protein | DS966_09480 | Not Available | Positive | 1913594 - 1914406 | 29360.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





