Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein | DS966_09330 | Not Available | Negative | 1882942 - 1883706 | 27450.0 |
| hypothetical protein | DS966_09335 | Not Available | Positive | 1883743 - 1883919 | 6451.92 |
| arac family transcriptional regulator | DS966_09340 | Not Available | Positive | 1884022 - 1884933 | 34868.2 |
| acyl-coa dehydrogenase | DS966_09345 | Not Available | Negative | 1884976 - 1886127 | 43004.6 |
| acetate coa-transferase ydif | DS966_09350 | Not Available | Negative | 1886141 - 1887736 | 57551.7 |
| 3-dehydroquinase | DS966_09355 | Not Available | Negative | 1887882 - 1888640 | 27468.2 |
| quinate/shikimate dehydrogenase | DS966_09360 | Not Available | Negative | 1888671 - 1889537 | 31243.6 |
| mfs transporter | DS966_09365 | Not Available | Negative | 1889549 - 1890814 | 46078.0 |
| mfs transporter | DS966_09370 | Not Available | Negative | 1891041 - 1892255 | 44597.7 |
| duf1870 family protein | DS966_09375 | Not Available | Negative | 1892355 - 1892711 | 13848.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





