Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l20 | DS966_09230 | Not Available | Positive | 1863576 - 1863932 | 13497.7 |
| phenylalanyl--trna ligase operon leader peptide | DS966_09235 | Not Available | Positive | 1864055 - 1864099 | 1762.13 |
| phenylalanine--trna ligase subunit alpha | DS966_09240 | Not Available | Positive | 1864383 - 1865366 | 36803.9 |
| phenylalanine--trna ligase subunit beta | DS966_09245 | Not Available | Positive | 1865381 - 1867768 | 87382.2 |
| integration host factor subunit alpha | DS966_09250 | Not Available | Positive | 1867773 - 1868072 | 11354.6 |
| vitamin b12 import system permease btuc | DS966_09255 | Not Available | Positive | 1868173 - 1869153 | 34951.5 |
| glutathione peroxidase | DS966_09260 | Not Available | Positive | 1869215 - 1869766 | 20426.5 |
| vitamin b12 import atp-binding protein btud | DS966_09265 | Not Available | Positive | 1869766 - 1870515 | 27084.9 |
| lipoprotein | DS966_09270 | Not Available | Positive | 1870593 - 1871057 | 17318.7 |
| eal domain-containing protein | DS966_09275 | Not Available | Positive | 1871304 - 1872017 | 27204.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





