Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | DS966_08970 | Not Available | Negative | 1815967 - 1817823 | 67234.0 |
| hypothetical protein | DS966_08975 | Not Available | Negative | 1817766 - 1817930 | 5825.97 |
| nad(p)h nitroreductase | DS966_08980 | Not Available | Positive | 1817984 - 1818535 | 20059.2 |
| hypothetical protein | DS966_08985 | Not Available | Positive | 1818561 - 1818710 | 5666.74 |
| selenide, water dikinase seld | DS966_08990 | Not Available | Positive | 1818652 - 1819695 | 36675.4 |
| dna topoisomerase iii | DS966_08995 | Not Available | Positive | 1819700 - 1821655 | 73325.0 |
| glutamate dehydrogenase | DS966_09000 | Not Available | Negative | 1821732 - 1823075 | 48572.2 |
| duf1496 domain-containing protein | DS966_09005 | Not Available | Positive | 1823311 - 1823583 | 9866.88 |
| pyrimidine (deoxy)nucleoside triphosphate diphosphatase | DS966_09010 | Not Available | Negative | 1823549 - 1823956 | 15015.8 |
| cdp-alcohol phosphatidyltransferase family protein | DS966_09015 | Not Available | Positive | 1824043 - 1824663 | 22597.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





