Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DS966_08820 | Not Available | Negative | 1787786 - 1787884 | 3458.45 |
| diguanylate cyclase | DS966_08825 | Not Available | Negative | 1787917 - 1788942 | 38527.7 |
| duf333 domain-containing protein | DS966_08830 | Not Available | Positive | 1789125 - 1789379 | 8942.87 |
| duf488 domain-containing protein | DS966_08835 | Not Available | Negative | 1789401 - 1789748 | 13356.9 |
| cyanate mfs transporter | DS966_08840 | Not Available | Negative | 1789803 - 1790984 | 41177.7 |
| arac family transcriptional regulator | DS966_08845 | Not Available | Positive | 1791081 - 1791902 | 30543.3 |
| duf441 domain-containing protein | DS966_08850 | Not Available | Negative | 1791859 - 1792305 | 15256.6 |
| hypothetical protein | DS966_08855 | Not Available | Positive | 1792427 - 1792579 | 5530.85 |
| ybak/prolyl-trna synthetase associated domain-containing protein | DS966_08860 | Not Available | Negative | 1792580 - 1793083 | 17850.7 |
| ggdef domain-containing protein | DS966_08865 | Not Available | Negative | 1793126 - 1794616 | 56633.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





