Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclease pin | DS966_08760 | Not Available | Negative | 1779289 - 1779852 | 20848.8 |
| molecular chaperone | DS966_08765 | Not Available | Negative | 1779888 - 1780619 | 26851.5 |
| papc/fimd family outer membrane usher protein | DS966_08770 | Not Available | Negative | 1780688 - 1783147 | 90519.2 |
| type 1 fimbrial protein | DS966_08775 | Not Available | Negative | 1783319 - 1783906 | 21825.2 |
| type 1 fimbrial protein | DS966_08780 | Not Available | Negative | 1783992 - 1784498 | 17242.2 |
| transcriptional regulator | DS966_08785 | Not Available | Negative | 1784543 - 1784800 | 9733.78 |
| transcriptional regulator | DS966_08795 | Not Available | Negative | 1786334 - 1786699 | 14159.4 |
| duf1869 domain-containing protein | DS966_08805 | Not Available | Positive | 1787072 - 1787254 | 6608.63 |
| glsb/yeaq/ymge family stress response membrane protein | DS966_08810 | Not Available | Positive | 1787402 - 1787650 | 8671.14 |
| hypothetical protein | DS966_08815 | Not Available | Negative | 1787709 - 1787783 | 2691.57 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





