Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | DS966_08300 | Not Available | Positive | 1676043 - 1676693 | 23579.4 |
| l-ribulose-5-phosphate 3-epimerase ulae | DS966_08305 | Not Available | Positive | 1676703 - 1677557 | 32036.4 |
| l-ribulose-5-phosphate 4-epimerase | DS966_08310 | Not Available | Positive | 1677557 - 1678243 | 25321.1 |
| duf1471 domain-containing protein | DS966_08315 | Not Available | Negative | 1678372 - 1678647 | 10149.9 |
| 30s ribosomal protein s6 | DS966_08320 | Not Available | Positive | 1678975 - 1679370 | 15187.9 |
| primosomal replication protein n | DS966_08325 | Not Available | Positive | 1679377 - 1679691 | 11472.9 |
| 30s ribosomal protein s18 | DS966_08330 | Not Available | Positive | 1679696 - 1679923 | 8986.94 |
| 50s ribosomal protein l9 | DS966_08335 | Not Available | Positive | 1679965 - 1680414 | 15770.0 |
| hypothetical protein | DS966_08340 | Not Available | Negative | 1680525 - 1680722 | 7826.58 |
| xre family transcriptional regulator | DS966_08345 | Not Available | Positive | 1680816 - 1681307 | 17704.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





