Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p lysine(34) lysyltransferase | DS966_08090 | Not Available | Positive | 1637151 - 1638128 | 36948.0 |
| glutamate/gamma-aminobutyrate family transporter yjem | DS966_08095 | Not Available | Positive | 1638347 - 1639849 | 54685.2 |
| miniconductance mechanosensitive channel mscm | DS966_08100 | Not Available | Negative | 1640000 - 1643323 | 124034.0 |
| phosphatidylserine decarboxylase | DS966_08105 | Not Available | Negative | 1643345 - 1644313 | 35984.4 |
| ribosome small subunit-dependent gtpase | DS966_08110 | Not Available | Negative | 1644410 - 1645462 | 39239.6 |
| oligoribonuclease | DS966_08115 | Not Available | Positive | 1645557 - 1646102 | 20816.8 |
| Trna-gly | Not Available | Not Available | Positive | 1646313 - 1646388 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1646425 - 1646500 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1646536 - 1646611 | Not Available |
| hypothetical protein | DS966_08135 | Not Available | Positive | 1646845 - 1646898 | 2056.38 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





