Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter subunit mdtn | DS966_07680 | Not Available | Negative | 1560153 - 1561184 | 36970.4 |
| hypothetical protein | DS966_07685 | Not Available | Negative | 1561203 - 1561478 | 10271.2 |
| alkyl/aryl-sulfatase | DS966_07690 | Not Available | Negative | 1561687 - 1563672 | 73296.1 |
| allose kinase | DS966_07695 | Not Available | Negative | 1563945 - 1564874 | 33849.8 |
| ribulose-phosphate 3-epimerase | DS966_07700 | Not Available | Negative | 1564858 - 1565553 | 26024.6 |
| d-allose abc transporter permease | DS966_07705 | Not Available | Negative | 1565564 - 1566544 | 34303.8 |
| d-allose abc transporter atp-binding protein alsa | DS966_07710 | Not Available | Negative | 1566523 - 1568055 | 56832.4 |
| d-allose transporter substrate-binding protein | DS966_07715 | Not Available | Negative | 1568182 - 1569117 | 32927.7 |
| murr/rpir family transcriptional regulator | DS966_07720 | Not Available | Negative | 1569176 - 1570066 | 32364.1 |
| ribose 5-phosphate isomerase b | DS966_07730 | Not Available | Positive | 1570425 - 1570874 | 16076.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





