Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine decarboxylase | DS966_07030 | Not Available | Negative | 1423491 - 1425626 | 79405.5 |
| hypothetical protein | DS966_07035 | Not Available | Negative | 1425707 - 1425910 | 7593.39 |
| duf554 domain-containing protein | DS966_07040 | Not Available | Positive | 1426025 - 1426732 | 24651.5 |
| Trna-phe | Not Available | Not Available | Positive | 1426838 - 1426913 | Not Available |
| duf4102 domain-containing protein | DS966_07050 | Not Available | Positive | 1427111 - 1428373 | 47985.1 |
| arac family transcriptional regulator | DS966_07060 | Not Available | Negative | 1429355 - 1430191 | 32633.9 |
| is66 family insertion sequence hypothetical protein | DS966_07085 | Not Available | Positive | 1433318 - 1433698 | 14144.2 |
| luxr family transcriptional regulator | DS966_07105 | Not Available | Negative | 1435968 - 1436477 | 19856.4 |
| sigma-70 family rna polymerase sigma factor | DS966_07110 | Not Available | Negative | 1436499 - 1436981 | 18537.9 |
| hemolysin activation protein | DS966_07115 | Not Available | Negative | 1437102 - 1439351 | 76383.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





