Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DS966_06255 | Not Available | Positive | 1258284 - 1259420 | 44179.4 |
| type vi secretion protein vask | DS966_06260 | Not Available | Positive | 1259430 - 1262783 | 125355.0 |
| type vi secretion system protein tssa | DS966_06265 | Not Available | Positive | 1262776 - 1264386 | 60054.1 |
| paar domain-containing protein | DS966_06270 | Not Available | Positive | 1264392 - 1265822 | 53234.7 |
| hypothetical protein | DS966_06275 | Not Available | Positive | 1265815 - 1266219 | 14881.8 |
| type vi secretion system baseplate subunit tssf | DS966_06280 | Not Available | Positive | 1266295 - 1268055 | 67214.2 |
| type vi secretion system baseplate subunit tssg | DS966_06285 | Not Available | Positive | 1268019 - 1269098 | 39398.7 |
| type vi secretion system lipoprotein tssj | DS966_06290 | Not Available | Positive | 1269079 - 1269615 | 20531.9 |
| type vi secretion system baseplate subunit tsse | DS966_06295 | Not Available | Positive | 1269619 - 1270047 | 16290.8 |
| type vi secretion system protein vasl | DS966_06300 | Not Available | Positive | 1270047 - 1271423 | 51951.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





