Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | DS966_06205 | Not Available | Positive | 1244230 - 1245567 | 49581.7 |
| dotu family type iv/vi secretion system protein | DS966_06210 | Not Available | Positive | 1245564 - 1246229 | 25282.8 |
| ompa family protein | DS966_06215 | Not Available | Positive | 1246242 - 1247894 | 60579.5 |
| hcp family type vi secretion system effector | DS966_06220 | Not Available | Positive | 1247952 - 1248443 | 18649.9 |
| type vi secretion system atpase tssh | DS966_06225 | Not Available | Positive | 1248635 - 1251271 | 97476.9 |
| type vi secretion system tip protein vgrg | DS966_06230 | Not Available | Positive | 1251283 - 1253763 | 91808.8 |
| hypothetical protein | DS966_06235 | Not Available | Positive | 1253783 - 1255570 | 67200.0 |
| hypothetical protein | DS966_06240 | Not Available | Positive | 1255548 - 1256666 | 43076.2 |
| hypothetical protein | DS966_06245 | Not Available | Positive | 1256763 - 1257866 | 42110.4 |
| paar domain-containing protein | DS966_06250 | Not Available | Positive | 1258022 - 1258282 | 8846.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





