Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase isoenzymes nickel incorporation protein hypb | DS966_05735 | Not Available | Positive | 1146584 - 1147456 | 31566.8 |
| hydrogenase assembly protein hypc | DS966_05740 | Not Available | Positive | 1147447 - 1147719 | 9732.58 |
| hydrogenase formation protein hypd | DS966_05745 | Not Available | Positive | 1147719 - 1148840 | 41366.7 |
| hydrogenase expression/formation protein hype | DS966_05750 | Not Available | Positive | 1148837 - 1149847 | 35066.5 |
| formate hydrogenlyase transcriptional activator flha | DS966_05755 | Not Available | Positive | 1149921 - 1151999 | 78456.5 |
| transporter | DS966_05760 | Not Available | Positive | 1152005 - 1152472 | 15893.3 |
| nitrous oxide-stimulated promoter family protein | DS966_05765 | Not Available | Negative | 1152511 - 1152855 | 13549.8 |
| dna mismatch repair protein muts | DS966_05770 | Not Available | Positive | 1153141 - 1155702 | 95338.6 |
| protein-serine/threonine phosphatase | DS966_05775 | Not Available | Positive | 1155808 - 1156464 | 25053.6 |
| deor/glpr transcriptional regulator | DS966_05780 | Not Available | Negative | 1156515 - 1157282 | 27460.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





