Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | DS966_05285 | Not Available | Positive | 1067934 - 1068416 | 17315.7 |
| 50s ribosomal protein l19 | DS966_05290 | Not Available | Negative | 1068493 - 1068840 | 13134.0 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DS966_05295 | Not Available | Negative | 1068882 - 1069649 | 28424.0 |
| ribosome maturation factor rimm | DS966_05300 | Not Available | Negative | 1069680 - 1070228 | 20606.6 |
| 30s ribosomal protein s16 | DS966_05305 | Not Available | Negative | 1070247 - 1070495 | 9191.08 |
| signal recognition particle protein | DS966_05310 | Not Available | Negative | 1070632 - 1071993 | 49790.5 |
| inner membrane protein ypjd | DS966_05315 | Not Available | Positive | 1072160 - 1072951 | 29312.0 |
| duf21 domain-containing protein | DS966_05320 | Not Available | Positive | 1073017 - 1074258 | 46353.9 |
| nucleotide exchange factor grpe | DS966_05325 | Not Available | Negative | 1074313 - 1074906 | 21813.1 |
| molecular chaperone grpe | DS966_05330 | Not Available | Negative | 1074903 - 1075097 | 7103.64 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





