Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DET47_102380 | Not Available | Positive | 886656 - 887060 | 14820.9 |
| gntr family transcriptional regulator | DET47_102381 | Not Available | Negative | 887057 - 887776 | 26752.5 |
| outer membrane oprd family porin | DET47_102382 | Not Available | Positive | 888059 - 889294 | 45651.2 |
| succinate dehydrogenase/fumarate reductase flavoprotein subunit | DET47_102383 | Not Available | Positive | 889947 - 891626 | 60604.4 |
| cytochrome c3-like protein | DET47_102384 | Not Available | Positive | 891696 - 892040 | 12704.4 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef)-like protein | DET47_102385 | Not Available | Negative | 892165 - 893142 | 36442.2 |
| peptidylprolyl isomerase | DET47_102386 | Not Available | Negative | 893285 - 893620 | 12240.8 |
| thioredoxin | DET47_102387 | Not Available | Positive | 893855 - 894277 | 15506.6 |
| hypothetical protein | DET47_102388 | Not Available | Positive | 894347 - 894769 | 15877.9 |
| sodium-dependent dicarboxylate transporter 2/3/5 | DET47_102389 | Not Available | Negative | 894946 - 896346 | 49982.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

