Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pap2 superfamily protein | DET47_102116 | Not Available | Negative | 591879 - 592403 | 18703.0 |
| diguanylate cyclase (ggdef)-like protein | DET47_102117 | Not Available | Positive | 592558 - 594480 | 72383.3 |
| amino acid abc transporter substrate-binding protein (paat family) | DET47_102118 | Not Available | Negative | 594477 - 595274 | 29308.2 |
| epoxyqueuosine reductase | DET47_102119 | Not Available | Positive | 595449 - 596651 | 44445.4 |
| methionine synthase (b12-independent) | DET47_102120 | Not Available | Negative | 596747 - 599017 | 84115.2 |
| lysr family transcriptional regulator | DET47_102121 | Not Available | Positive | 599217 - 600122 | 33892.2 |
| hdod domain-containing protein | DET47_102122 | Not Available | Negative | 600202 - 600930 | 27261.0 |
| iron complex outermembrane receptor protein | DET47_102123 | Not Available | Negative | 601210 - 603171 | 71541.6 |
| hypothetical protein | DET47_102125 | Not Available | Negative | 603650 - 605092 | 52843.0 |
| pyrimidine-specific ribonucleoside hydrolase | DET47_102126 | Not Available | Positive | 605327 - 606283 | 34620.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

