Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DET47_1026 | Not Available | Positive | 462218 - 464515 | 86160.3 |
| antitoxin component ywqk of ywqjk toxin-antitoxin module | DET47_1027 | Not Available | Positive | 464525 - 466255 | 67069.0 |
| antitoxin component ywqk of ywqjk toxin-antitoxin module | DET47_1028 | Not Available | Positive | 466415 - 468727 | 88425.7 |
| ca2+:h+ antiporter | DET47_1029 | Not Available | Positive | 468871 - 469968 | 39323.4 |
| hypothetical protein | DET47_10210 | Not Available | Negative | 469998 - 470903 | 35527.5 |
| murein-dd-endopeptidase | DET47_10211 | Not Available | Negative | 471068 - 472036 | 35662.4 |
| rimj/riml family protein n-acetyltransferase | DET47_10212 | Not Available | Negative | 472433 - 472924 | 18630.2 |
| putative effector of murein hydrolase | DET47_10213 | Not Available | Negative | 473100 - 473822 | 26211.4 |
| holin-like protein | DET47_10214 | Not Available | Negative | 473822 - 474256 | 16170.3 |
| lysr family transcriptional regulator | DET47_10215 | Not Available | Positive | 474379 - 475269 | 32797.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

