Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-galactose 4-epimerase | DET47_101337 | Not Available | Positive | 370554 - 371567 | 36344.1 |
| ferredoxin-type protein napf | DET47_101338 | Not Available | Positive | 371661 - 372143 | 17783.2 |
| cytoskeletal protein ccma (bactofilin family) | DET47_101339 | Not Available | Positive | 372256 - 372705 | 16243.8 |
| lysr family transcriptional regulator | DET47_101340 | Not Available | Positive | 373024 - 373998 | 36705.5 |
| omca/mtrc family decaheme c-type cytochrome | DET47_101341 | Not Available | Positive | 374466 - 376763 | 79793.0 |
| duf2982 family protein | DET47_101342 | Not Available | Negative | 376870 - 377553 | 25217.0 |
| uncharacterized sam-binding protein ycdf (duf218 family) | DET47_101343 | Not Available | Negative | 377625 - 378371 | 27719.2 |
| n-acetylglucosamine kinase | DET47_101344 | Not Available | Negative | 378545 - 379462 | 31875.2 |
| 3'(2'),5'-bisphosphate nucleotidase | DET47_101345 | Not Available | Negative | 379524 - 380330 | 29040.5 |
| dtdp-4-dehydrorhamnose reductase | DET47_101346 | Not Available | Negative | 380698 - 381873 | 42463.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

