Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+-dicarboxylate symporter | DET47_12815 | Not Available | Positive | 4845160 - 4846413 | 44066.3 |
| hypothetical protein | DET47_12816 | Not Available | Positive | 4846646 - 4846813 | 6233.32 |
| oxaloacetate decarboxylase beta subunit | DET47_12817 | Not Available | Negative | 4846980 - 4848110 | 39056.5 |
| oxaloacetate decarboxylase alpha subunit | DET47_12818 | Not Available | Negative | 4848119 - 4849945 | 66441.9 |
| oxaloacetate decarboxylase gamma subunit | DET47_12819 | Not Available | Negative | 4849957 - 4850223 | 9570.86 |
| hypothetical protein | DET47_1291 | Not Available | Positive | 4851317 - 4851523 | 8212.79 |
| putative porin | DET47_1292 | Not Available | Positive | 4851668 - 4852696 | 37729.2 |
| lysr family transcriptional regulator | DET47_1293 | Not Available | Positive | 4852820 - 4853701 | 32695.2 |
| uncharacterized protein duf819 | DET47_1294 | Not Available | Positive | 4853740 - 4854417 | 25016.5 |
| serine protease | DET47_1301 | Not Available | Positive | 4874793 - 4877249 | 84959.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

