Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ca-activated chloride channel family protein | DET47_1285 | Not Available | Negative | 4830985 - 4832856 | 68282.4 |
| sulp family sulfate permease | DET47_1286 | Not Available | Positive | 4833089 - 4834852 | 62372.0 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DET47_1287 | Not Available | Positive | 4835123 - 4835614 | 17004.8 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | DET47_1288 | Not Available | Positive | 4835614 - 4836717 | 41119.2 |
| diguanylate cyclase (ggdef)-like protein | DET47_1289 | Not Available | Positive | 4836881 - 4838134 | 47863.8 |
| hypothetical protein | DET47_12810 | Not Available | Negative | 4838328 - 4838981 | 24845.3 |
| hypothetical protein | DET47_12811 | Not Available | Negative | 4839113 - 4839577 | 17069.1 |
| glutamate-cysteine ligase | DET47_12812 | Not Available | Negative | 4839574 - 4841223 | 61782.4 |
| zinc protease | DET47_12813 | Not Available | Negative | 4841409 - 4844309 | 106321.0 |
| membrane protein yqaa with snare-associated domain | DET47_12814 | Not Available | Negative | 4844442 - 4844867 | 14986.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

