Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein/diguanylate cyclase (ggdef)-like protein | DET47_12720 | Not Available | Negative | 4805209 - 4809735 | 170262.0 |
| 2-methylaconitate cis-trans isomerase | DET47_12721 | Not Available | Negative | 4810107 - 4811312 | 41958.2 |
| aconitase /2-methylcitrate dehydratase (trans-methylaconitate-forming) | DET47_12722 | Not Available | Negative | 4811406 - 4814009 | 94723.2 |
| 2-methylcitrate synthase | DET47_12723 | Not Available | Negative | 4814090 - 4815217 | 41424.5 |
| methylisocitrate lyase | DET47_12724 | Not Available | Negative | 4815385 - 4816263 | 31950.3 |
| gntr family transcriptional regulator | DET47_12725 | Not Available | Negative | 4816316 - 4817083 | 28520.2 |
| uncharacterized protein ybbk (duf523 family) | DET47_12726 | Not Available | Positive | 4817408 - 4817878 | 16525.0 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DET47_12727 | Not Available | Negative | 4817886 - 4818830 | 35339.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DET47_12728 | Not Available | Negative | 4818844 - 4819740 | 34196.1 |
| magnesium chelatase family protein | DET47_12729 | Not Available | Negative | 4819853 - 4821379 | 55419.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

