Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DET47_12520 | Not Available | Negative | 4711014 - 4712153 | 43521.7 |
| phytanoyl-coa dioxygenase phyh | DET47_12521 | Not Available | Negative | 4712153 - 4714198 | 77199.5 |
| aspartyl/asparaginyl beta-hydroxylase | DET47_12522 | Not Available | Negative | 4714176 - 4714763 | 22232.6 |
| putative hydrolase of the had superfamily | DET47_12523 | Not Available | Positive | 4714924 - 4715586 | 25228.3 |
| type ii secretion system protein n (gspn) | DET47_12524 | Not Available | Negative | 4715730 - 4716491 | 27433.6 |
| type ii secretion system protein m (gspm) | DET47_12525 | Not Available | Negative | 4716506 - 4716982 | 17490.0 |
| general secretion pathway protein l | DET47_12526 | Not Available | Negative | 4716984 - 4718171 | 43406.8 |
| hypothetical protein | DET47_12527 | Not Available | Negative | 4718168 - 4718263 | 3388.96 |
| hypothetical protein | DET47_12528 | Not Available | Negative | 4718355 - 4718540 | 6302.69 |
| type ii secretion system protein k (gspk) | DET47_12529 | Not Available | Negative | 4718540 - 4719538 | 37061.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

