Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-5-phosphate 3-epimerase | DET47_12241 | Not Available | Negative | 4540544 - 4541218 | 24186.4 |
| hypothetical protein | DET47_12242 | Not Available | Positive | 4541495 - 4541860 | 13692.1 |
| duf2970 family protein | DET47_12243 | Not Available | Positive | 4541860 - 4542045 | 6773.48 |
| dna adenine methylase | DET47_12244 | Not Available | Negative | 4542064 - 4542903 | 31963.9 |
| damx protein | DET47_12245 | Not Available | Negative | 4542952 - 4544364 | 51906.3 |
| 3-dehydroquinate synthase | DET47_12246 | Not Available | Negative | 4544404 - 4545480 | 39192.5 |
| shikimate kinase | DET47_12247 | Not Available | Negative | 4545490 - 4546005 | 19203.9 |
| type iv pilus assembly protein pilq | DET47_12248 | Not Available | Negative | 4546222 - 4548273 | 75145.0 |
| type iv pilus assembly protein pilp | DET47_12249 | Not Available | Negative | 4548295 - 4548810 | 19206.0 |
| type iv pilus assembly protein pilo | DET47_12250 | Not Available | Negative | 4548810 - 4549433 | 23463.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

