Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnt-i system low-affinity gluconate transporter | DET47_12220 | Not Available | Positive | 4519924 - 4521267 | 46655.7 |
| laci family transcriptional regulator | DET47_12221 | Not Available | Negative | 4521321 - 4522319 | 36510.2 |
| putative radical sam protein ygiq | DET47_12222 | Not Available | Negative | 4522542 - 4524971 | 89030.3 |
| hypothetical protein | DET47_12223 | Not Available | Negative | 4525187 - 4525597 | 14559.5 |
| uncharacterized membrane protein yjjp (duf1212 family) | DET47_12224 | Not Available | Positive | 4525812 - 4526975 | 41816.6 |
| hypothetical protein | DET47_12225 | Not Available | Positive | 4527167 - 4528813 | 62360.1 |
| dj-1/pfpi family protein | DET47_12226 | Not Available | Negative | 4528879 - 4529583 | 25616.9 |
| tetr family transcriptional regulator | DET47_12227 | Not Available | Positive | 4529822 - 4530448 | 23968.0 |
| hypothetical protein | DET47_12228 | Not Available | Negative | 4530477 - 4530731 | 9666.23 |
| hypothetical protein | DET47_12229 | Not Available | Negative | 4530743 - 4531246 | 18346.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

