Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium uptake protein trkh | DET47_12120 | Not Available | Negative | 4441129 - 4442586 | 53416.2 |
| putative yigz family protein | DET47_12121 | Not Available | Negative | 4442664 - 4443278 | 22366.8 |
| xaa-pro dipeptidase | DET47_12122 | Not Available | Negative | 4443306 - 4444628 | 50014.5 |
| short chain enoyl-coa hydratase /3-hydroxyacyl-coa dehydrogenase | DET47_12123 | Not Available | Positive | 4445119 - 4447269 | 76662.9 |
| 3-ketoacyl-coa thiolase | DET47_12124 | Not Available | Positive | 4447292 - 4448455 | 40580.5 |
| diguanylate cyclase (ggdef)-like protein | DET47_12125 | Not Available | Positive | 4448695 - 4449861 | 44162.6 |
| trna 2-thiouridine synthesizing protein a | DET47_12126 | Not Available | Positive | 4450037 - 4450282 | 9057.02 |
| mosc domain-containing protein | DET47_12127 | Not Available | Positive | 4450331 - 4450777 | 16364.1 |
| imidazolonepropionase-like amidohydrolase | DET47_12128 | Not Available | Positive | 4451021 - 4454209 | 117745.0 |
| dna-3-methyladenine glycosylase i | DET47_12129 | Not Available | Negative | 4454393 - 4454995 | 22588.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

