Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenocysteine lyase/cysteine desulfurase | DET47_12021 | Not Available | Negative | 4364171 - 4365292 | 41778.1 |
| uncharacterized protein duf1864 | DET47_12022 | Not Available | Negative | 4365297 - 4366475 | 44554.1 |
| anaerobic c4-dicarboxylate transporter dcub | DET47_12023 | Not Available | Positive | 4366740 - 4368083 | 48263.6 |
| chap domain-containing protein | DET47_12024 | Not Available | Positive | 4368274 - 4368939 | 25240.1 |
| hypothetical protein | DET47_12025 | Not Available | Positive | 4368952 - 4369542 | 22743.9 |
| peptidase m23-like protein | DET47_12026 | Not Available | Positive | 4369580 - 4370092 | 18576.5 |
| iron complex outermembrane receptor protein | DET47_12027 | Not Available | Positive | 4370728 - 4372905 | 79379.9 |
| uncharacterized membrane protein yqae (upf0057 family) | DET47_12028 | Not Available | Negative | 4372978 - 4373145 | 6010.9 |
| diguanylate cyclase (ggdef)-like protein | DET47_12029 | Not Available | Positive | 4373405 - 4374574 | 43635.3 |
| trna pseudouridine32 synthase/23s rrna pseudouridine746 synthase | DET47_12030 | Not Available | Negative | 4374601 - 4375293 | 25477.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

