Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium uptake protein trkh | DET47_11816 | Not Available | Negative | 4178944 - 4180284 | 48051.9 |
| trk system potassium uptake protein trka | DET47_11817 | Not Available | Negative | 4180310 - 4181011 | 25396.0 |
| winged helix family two component transcriptional regulator | DET47_11818 | Not Available | Negative | 4181044 - 4181727 | 25788.2 |
| phospho-acceptor domain-containing protein | DET47_11819 | Not Available | Negative | 4181728 - 4182750 | 37504.4 |
| hypothetical protein | DET47_11820 | Not Available | Negative | 4183058 - 4183981 | 34325.1 |
| hypothetical protein | DET47_11821 | Not Available | Positive | 4184269 - 4184538 | 10270.8 |
| signal transduction histidine kinase lyts | DET47_11822 | Not Available | Positive | 4184566 - 4186239 | 62456.6 |
| lyttr family two component transcriptional regulator /response regulator receiver protein | DET47_11823 | Not Available | Positive | 4186233 - 4186964 | 28367.2 |
| ofa family oxalate/formate antiporter-like mfs transporter | DET47_11824 | Not Available | Positive | 4187072 - 4188316 | 44130.5 |
| hypothetical protein | DET47_11825 | Not Available | Positive | 4188451 - 4189188 | 26497.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

