Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpx | DET47_101218 | Not Available | Negative | 229667 - 230947 | 46447.7 |
| atp-dependent clp protease proteolytic subunit clpp | DET47_101219 | Not Available | Negative | 231032 - 231640 | 22137.9 |
| trigger factor | DET47_101220 | Not Available | Negative | 231730 - 233034 | 47747.0 |
| Trna-his | Not Available | Not Available | Positive | 233296 - 233371 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 233381 - 233457 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 233574 - 233650 | Not Available |
| methenyltetrahydrofolate cyclohydrolase /5,10-methylenetetrahydrofolate dehydrogenase (nadp+) | DET47_101224 | Not Available | Positive | 234119 - 234973 | 30533.9 |
| cysteinyl-trna synthetase | DET47_101225 | Not Available | Negative | 235124 - 236503 | 51937.5 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | DET47_101226 | Not Available | Positive | 236644 - 237138 | 18039.4 |
| udp-2,3-diacylglucosamine hydrolase | DET47_101227 | Not Available | Positive | 237148 - 237873 | 27244.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

