Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemy protein | DET47_11294 | Not Available | Positive | 3593017 - 3594183 | 44057.8 |
| hypothetical protein | DET47_11295 | Not Available | Positive | 3594618 - 3596922 | 78087.2 |
| putative secreted protein (type i secretion substrate) | DET47_11296 | Not Available | Positive | 3597022 - 3599480 | 85006.7 |
| atp-binding cassette subfamily c protein lapb | DET47_11297 | Not Available | Positive | 3599571 - 3601748 | 78977.6 |
| adhesin transport system membrane fusion protein | DET47_11298 | Not Available | Positive | 3601745 - 3603127 | 51261.0 |
| adhesin transport system outer membrane protein | DET47_11299 | Not Available | Positive | 3603157 - 3604578 | 52316.4 |
| outer membrane protein ompa-like peptidoglycan-associated protein | DET47_112100 | Not Available | Positive | 3604575 - 3605183 | 22520.3 |
| putative transglutaminase-like cysteine proteinase | DET47_112101 | Not Available | Positive | 3605203 - 3605910 | 27022.6 |
| diguanylate cyclase/phosphodiesterase | DET47_112102 | Not Available | Positive | 3605919 - 3607838 | 73020.4 |
| Trna-pro | Not Available | Not Available | Positive | 3608098 - 3608174 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

