Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate binding protein with cbm9 domain | DET47_111109 | Not Available | Negative | 3469919 - 3472360 | 91884.9 |
| cysz protein | DET47_111110 | Not Available | Negative | 3472505 - 3473284 | 29512.0 |
| condensin subunit smc | DET47_111111 | Not Available | Positive | 3473389 - 3476898 | 131301.0 |
| cell division protein zipa | DET47_111112 | Not Available | Positive | 3476922 - 3477995 | 39834.3 |
| dna ligase (nad+) | DET47_111113 | Not Available | Positive | 3478099 - 3480156 | 74430.2 |
| duf2919 family protein | DET47_111114 | Not Available | Positive | 3480403 - 3480888 | 18876.5 |
| metal dependent phosphohydrolase | DET47_111115 | Not Available | Positive | 3481111 - 3482316 | 44704.2 |
| nucleoside-diphosphate-sugar epimerase | DET47_111116 | Not Available | Positive | 3482373 - 3483236 | 30686.8 |
| thiol:disulfide interchange protein dsba | DET47_111117 | Not Available | Positive | 3483358 - 3483978 | 22712.4 |
| putative solute:sodium symporter small subunit | DET47_111118 | Not Available | Positive | 3484611 - 3484877 | 10016.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

