Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rsec/mucc-like positive regulator of sigma(e) | DET47_11091 | Not Available | Negative | 3279102 - 3279575 | 16807.4 |
| mucb/rseb-like sigma(e) regulatory protein | DET47_11092 | Not Available | Negative | 3279586 - 3280518 | 34960.3 |
| sigma-e factor negative regulatory protein rsea | DET47_11093 | Not Available | Negative | 3280531 - 3281157 | 22546.5 |
| rna polymerase rpoe-like sigma-24 subunit | DET47_11094 | Not Available | Negative | 3281199 - 3281777 | 21883.1 |
| l-aspartate oxidase | DET47_11095 | Not Available | Positive | 3281968 - 3283581 | 59839.2 |
| antitoxin cptb | DET47_11096 | Not Available | Negative | 3284037 - 3284285 | 9733.95 |
| lysr family transcriptional regulator | DET47_11097 | Not Available | Negative | 3284371 - 3285240 | 32538.4 |
| hypothetical protein | DET47_11098 | Not Available | Negative | 3285394 - 3285780 | 13925.7 |
| sodium/proton antiporter (nhaa family) | DET47_11099 | Not Available | Negative | 3285783 - 3286952 | 40813.5 |
| thymidylate synthase | DET47_110100 | Not Available | Negative | 3287070 - 3287864 | 30036.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

