Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | DET47_11029 | Not Available | Negative | 3210814 - 3212547 | 65402.7 |
| aromatic-ring opening dioxygenase ligab liga subunit | DET47_11030 | Not Available | Negative | 3212611 - 3212823 | 7766.18 |
| tetrapyrrole (corrin/porphyrin) methylase-like protein | DET47_11031 | Not Available | Negative | 3212882 - 3213673 | 29173.1 |
| beta-barrel assembly machine subunit bame | DET47_11032 | Not Available | Positive | 3214103 - 3214594 | 18520.1 |
| hypothetical protein | DET47_11033 | Not Available | Negative | 3214684 - 3215016 | 12235.7 |
| ribosome-associated toxin rata of ratab toxin-antitoxin module | DET47_11034 | Not Available | Negative | 3215006 - 3215443 | 16260.7 |
| ssra-binding protein | DET47_11035 | Not Available | Positive | 3215722 - 3216213 | 18642.0 |
| Tmrna,resume consensus sequence (at 84): tatagttgcaaacgacga | Not Available | Not Available | Positive | 3216285 - 3216640 | Not Available |
| superfamily ii dna/rna helicase | DET47_11037 | Not Available | Negative | 3216816 - 3218054 | 45265.2 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef)-like protein | DET47_11038 | Not Available | Negative | 3218154 - 3220874 | 100507.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

