Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase c | DET47_101119 | Not Available | Negative | 121200 - 122159 | 36357.4 |
| ribonuclease e | DET47_101120 | Not Available | Positive | 122702 - 126142 | 126033.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 125950 - 126065 | Not Available |
| putative cold-shock dna-binding protein | DET47_101122 | Not Available | Negative | 127149 - 127358 | 7537.81 |
| 23s rrna m(1)g-745 methyltransferase | DET47_101123 | Not Available | Negative | 127666 - 128481 | 30695.9 |
| hypothetical protein | DET47_101124 | Not Available | Negative | 128521 - 129369 | 31999.8 |
| hypothetical protein | DET47_101125 | Not Available | Negative | 129388 - 129519 | 4838.36 |
| uncharacterized protein ybcv (duf1398 family) | DET47_101126 | Not Available | Negative | 129658 - 130065 | 15065.8 |
| hypothetical protein | DET47_101127 | Not Available | Positive | 130517 - 131440 | 35464.0 |
| iron complex outermembrane receptor protein | DET47_101128 | Not Available | Negative | 131615 - 133582 | 74003.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

