Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | DET47_10190 | Not Available | Negative | 89951 - 90820 | 32972.2 |
| rnase t | DET47_10191 | Not Available | Positive | 90962 - 91630 | 24276.9 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | DET47_10192 | Not Available | Negative | 91732 - 92337 | 21991.1 |
| hypothetical protein | DET47_10193 | Not Available | Positive | 92723 - 94042 | 45929.4 |
| diguanylate cyclase (ggdef)-like protein | DET47_10194 | Not Available | Negative | 94207 - 95613 | 53440.6 |
| uracil phosphoribosyltransferase | DET47_10195 | Not Available | Negative | 95867 - 96493 | 22571.7 |
| phosphoribosylformylglycinamidine cyclo-ligase | DET47_10196 | Not Available | Positive | 96824 - 97861 | 36815.2 |
| formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | DET47_10197 | Not Available | Positive | 97861 - 98505 | 23561.9 |
| nagd protein | DET47_10198 | Not Available | Positive | 98665 - 99411 | 27047.3 |
| hypothetical protein | DET47_10199 | Not Available | Negative | 99462 - 99581 | 4606.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

