Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (p)ppgpp synthetase i spot/rela | DET47_103154 | Not Available | Positive | 1074382 - 1076589 | 83256.1 |
| hypothetical protein | DET47_103155 | Not Available | Negative | 1077059 - 1078000 | 35581.8 |
| hypothetical protein | DET47_103156 | Not Available | Negative | 1078130 - 1078297 | 6239.43 |
| hypothetical protein | DET47_103157 | Not Available | Negative | 1078758 - 1079090 | 13001.7 |
| uncharacterized protein duf1852 | DET47_103158 | Not Available | Positive | 1079698 - 1080672 | 37209.8 |
| methionine synthase (b12-independent) | DET47_103159 | Not Available | Positive | 1080728 - 1081807 | 40594.8 |
| amidase | DET47_103160 | Not Available | Negative | 1082003 - 1083709 | 61148.5 |
| agmatine deiminase | DET47_103161 | Not Available | Negative | 1083783 - 1084895 | 40810.2 |
| atp diphosphatase | DET47_103162 | Not Available | Positive | 1085350 - 1086327 | 36993.7 |
| ctp synthase | DET47_103163 | Not Available | Positive | 1086444 - 1088081 | 60112.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

