Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nusb antitermination factor | DET47_103144 | Not Available | Positive | 1062961 - 1063365 | 15227.3 |
| thiamine-phosphate kinase | DET47_103145 | Not Available | Positive | 1063429 - 1064400 | 34595.3 |
| phosphatidylglycerophosphatase | DET47_103146 | Not Available | Positive | 1064416 - 1064910 | 17872.4 |
| dna replication and repair protein recn | DET47_103147 | Not Available | Negative | 1065064 - 1066722 | 61162.8 |
| hypothetical protein | DET47_103148 | Not Available | Negative | 1066851 - 1067813 | 34437.4 |
| lysr family transcriptional regulator | DET47_103149 | Not Available | Positive | 1068104 - 1069003 | 33712.9 |
| uncharacterized protein duf3319 | DET47_103150 | Not Available | Negative | 1069024 - 1069257 | 8886.88 |
| hypothetical protein | DET47_103151 | Not Available | Negative | 1069401 - 1070000 | 22146.5 |
| hpt sensor hybrid histidine kinase | DET47_103152 | Not Available | Negative | 1069975 - 1072776 | 103258.0 |
| 23s rrna m(5)u-1939 methyltransferase | DET47_103153 | Not Available | Positive | 1072877 - 1074229 | 49150.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

