Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain 97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351868 bp
Thymine Count
1350539 bp
Guanine Count
1128156 bp
Cytosine Count
1123374 bp
Genome Length
4954542 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-binding factor a | DET47_10373 | Not Available | Positive | 977473 - 977931 | 17252.5 |
| trna pseudouridine synthase b | DET47_10374 | Not Available | Positive | 977931 - 978896 | 35616.0 |
| ssu ribosomal protein s15p | DET47_10376 | Not Available | Positive | 979045 - 979314 | 10235.4 |
| diguanylate cyclase/phosphodiesterase | DET47_10377 | Not Available | Negative | 979506 - 981560 | 76530.1 |
| polyribonucleotide nucleotidyltransferase | DET47_10378 | Not Available | Positive | 981756 - 983855 | 75171.2 |
| lipoprotein nlpi | DET47_10379 | Not Available | Positive | 984049 - 984951 | 34079.6 |
| peptide chain release factor 3 (brf-3) | DET47_10380 | Not Available | Positive | 985051 - 986631 | 59266.3 |
| hypothetical protein | DET47_10381 | Not Available | Positive | 986723 - 986926 | 7612.25 |
| tatd dnase family protein | DET47_10382 | Not Available | Positive | 986937 - 987701 | 28219.4 |
| cnt family concentrative nucleoside transporter | DET47_10383 | Not Available | Positive | 987878 - 989173 | 44573.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

