Arenicella xantha strain DSM 24032

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Arenicellales

Family

Arenicellaceae

Genus

Arenicella

Description

Arenicella xantha strain DSM 24032 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain is classified as mesophilic, with an optimal growth temperature of 25°C. It possesses a single replicon, which is indicative of its genomic organization. The aerobic nature of Arenicella xantha suggests that it thrives in environments with sufficient oxygen, which aligns with its mesophilic temperature range, allowing for growth in moderate temperature habitats. The non-motile characteristic indicates that this bacterium likely relies on environmental factors for dispersal rather than active movement, which could influence its ecological niche. Understanding the traits of Arenicella xantha strain DSM 24032 can provide insights into its potential role in various ecosystems, particularly in aerobic environments where organic matter is present. Its single replicon may also reflect a streamlined genomic structure that could be advantageous in stable environments, allowing for efficient replication and resource utilization. The specific growth conditions and metabolic capabilities of this strain may contribute to its ecological function, potentially involving nutrient cycling or organic matter decomposition in its habitat. Overall, the traits of Arenicella xantha strain DSM 24032 highlight its adaptation to specific ecological niches, emphasizing the importance of microbial diversity in maintaining ecosystem balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderArenicellales
FamilyArenicellaceae
GenusArenicella
SpeciesArenicella xantha
Strainstrain DSM 24032

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arenicella xantha strain DSM 24032 Ga0244552_129, whole genome

Gene Summary

Adenine Count

1192459 bp

Thymine Count

1147170 bp

Guanine Count

1014398 bp

Cytosine Count

1085655 bp

Genome Length

4440696 bp

Protein-coding Genes

3913 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-dehydro-3-deoxygluconokinaseDFR28_101390Not AvailableNegative446448 - 44744036182.9
gluconate 5-dehydrogenaseDFR28_101391Not AvailableNegative447558 - 44834927413.1
4-deoxy-l-threo-5-hexosulose-uronate ketol-isomeraseDFR28_101392Not AvailableNegative448351 - 44920531631.1
rhamnogalacturonyl hydrolase yesrDFR28_101393Not AvailableNegative449211 - 45165890100.6
tripartite atp-independent transporter dctm subunitDFR28_101394Not AvailableNegative451682 - 45297744864.3
trap-type c4-dicarboxylate transport system permease small subunitDFR28_101395Not AvailableNegative452974 - 45346517630.0
tripartite atp-independent transporter dctp family solute receptorDFR28_101396Not AvailableNegative453479 - 45446236153.6
pectate lyase-like proteinDFR28_101397Not AvailablePositive454580 - 45606754683.4
tonb-dependent receptorDFR28_101398Not AvailableNegative456325 - 45902198341.4
laci family transcriptional regulatorDFR28_101399Not AvailablePositive459508 - 46053937558.4

Displaying genes 401 – 410 of 3964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.