Roseovarius sp. TE539

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius sp. TE539 is a Gram-negative bacterium characterized by its single replicon. It is cataloged under the accession number QNGB00000000.1, which provides a unique identifier for its genomic information. As a member of the Roseovarius genus, this bacterium likely shares common traits with other species within this group, including potential ecological roles in marine environments, although specific ecological interactions for Roseovarius sp. TE539 are not detailed in the provided data. The Gram-negative characteristic indicates that Roseovarius sp. TE539 possesses a thinner peptidoglycan layer and an outer membrane, which is typical for such bacteria. This structural feature can influence its interactions with other microorganisms and its survival in various environments. Overall, understanding the genomic features and classification of Roseovarius sp. TE539 may provide insights into its ecological role, particularly in marine ecosystems where members of the Roseovarius genus are often found. The single replicon suggests a streamlined genome that could be advantageous for adaptability in fluctuating environments, although specific adaptations remain unspecified in the available data. Thus, further research may elucidate the ecological significance of Roseovarius sp. TE539 in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius sp. TE539
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius sp. TE539 contig83, whole genome shotgun sequence.

Gene Summary

Adenine Count

678553 bp

Thymine Count

684510 bp

Guanine Count

1180291 bp

Cytosine Count

1171973 bp

Genome Length

3715327 bp

Protein-coding Genes

3458 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ump kinaseDQW77_02005Not AvailablePositive416777 - 41750826282.8
ribosome recycling factorDQW77_02010Not AvailablePositive417559 - 41812220834.8
di-trans,poly-cis-decaprenylcistransferaseDQW77_02015Not AvailablePositive418140 - 41886527658.1
phosphatidate cytidylyltransferaseDQW77_02020Not AvailablePositive418862 - 41965026577.4
1-deoxy-d-xylulose-5-phosphate reductoisomeraseDQW77_02025Not AvailablePositive419647 - 42081941346.3
rip metalloprotease rsepDQW77_02030Not AvailablePositive420829 - 42217547478.7
outer membrane protein assembly factor bamaDQW77_02035Not AvailablePositive422616 - 42487483302.5
omph family outer membrane proteinDQW77_02040Not AvailablePositive424877 - 42548522443.4
3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabzDQW77_02045Not AvailablePositive425555 - 42601917268.3
acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferaseDQW77_02050Not AvailablePositive426028 - 42683428415.1

Displaying genes 441 – 450 of 3532 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.