Roseovarius sp. TE539

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius sp. TE539 is a Gram-negative bacterium characterized by its single replicon. It is cataloged under the accession number QNGB00000000.1, which provides a unique identifier for its genomic information. As a member of the Roseovarius genus, this bacterium likely shares common traits with other species within this group, including potential ecological roles in marine environments, although specific ecological interactions for Roseovarius sp. TE539 are not detailed in the provided data. The Gram-negative characteristic indicates that Roseovarius sp. TE539 possesses a thinner peptidoglycan layer and an outer membrane, which is typical for such bacteria. This structural feature can influence its interactions with other microorganisms and its survival in various environments. Overall, understanding the genomic features and classification of Roseovarius sp. TE539 may provide insights into its ecological role, particularly in marine ecosystems where members of the Roseovarius genus are often found. The single replicon suggests a streamlined genome that could be advantageous for adaptability in fluctuating environments, although specific adaptations remain unspecified in the available data. Thus, further research may elucidate the ecological significance of Roseovarius sp. TE539 in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius sp. TE539
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius sp. TE539 contig83, whole genome shotgun sequence.

Gene Summary

Adenine Count

678553 bp

Thymine Count

684510 bp

Guanine Count

1180291 bp

Cytosine Count

1171973 bp

Genome Length

3715327 bp

Protein-coding Genes

3458 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sam-dependent dna methyltransferaseDQW77_17550Not AvailableNegative3633189 - 363455351145.5
hypothetical proteinDQW77_17555Not AvailableNegative3635134 - 3639414149743.0
xre family transcriptional regulatorDQW77_17570Not AvailableNegative3641190 - 364159114762.1
Trna-lysNot AvailableNot AvailablePositive3643022 - 3643097Not Available
diaminopimelate epimeraseDQW77_17585Not AvailablePositive3643206 - 364405729835.5
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabDQW77_17590Not AvailablePositive3644054 - 364531046297.8
porin family proteinDQW77_17595Not AvailableNegative3645535 - 364622424730.2
ubiquinol-cytochrome c reductase iron-sulfur subunitDQW77_17600Not AvailablePositive3646456 - 364701919878.4
cytochrome bDQW77_17605Not AvailablePositive3647031 - 364835349466.9
cytochrome c1DQW77_17610Not AvailablePositive3648370 - 364922130669.3

Displaying genes 3461 – 3470 of 3532 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.